Detailed information of matrix profile UN1080.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: LMX1B::FLI1
Matrix ID: UN1080.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HD-LIM::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O60663   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 103 510 694 33 75 565 16 156 26 5 6 8 33 105 ]
C [ 39 46 26 44 101 17 566 15 6 784 787 18 170 174 ]
G [ 28 94 54 100 150 211 43 14 18 4 5 627 449 57 ]
T [ 631 151 27 624 475 8 176 616 751 8 3 148 149 465 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1080.1 UN1080 1 LMX1B::FLI1 Homo sapiens
HD-LIM::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: