Detailed information of matrix profile UN1068.1

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Profile summary

Name: HOXD10::GABPA
Matrix ID: UN1068.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P28358   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 195 120 23 53 1931 1879 194 38 633 1097 33 1441 1933 1775 1325 ]
C [ 1576 1901 32 70 71 71 120 301 1282 47 40 66 82 144 299 ]
G [ 301 65 2052 1871 29 51 1794 10 112 944 59 46 64 59 208 ]
T [ 52 38 17 130 93 123 16 1775 97 36 1992 571 45 146 292 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1068.1 UN1068 1 HOXD10::GABPA Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: