Detailed information of matrix profile UN1065.1

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Profile summary

Name: HOXC11::SOX11
Matrix ID: UN1065.1
Class: Homeo domain factors::High-mobility group (HMG) domain factors
Family: HOX::SOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   P35716  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1930 167 1929 1871 1057 759 573 726 254 685 1230 66 1249 1699 1507 ]
C [ 71 1683 37 135 88 89 436 344 726 1098 85 304 123 189 212 ]
G [ 59 90 89 50 60 1229 951 980 81 128 675 46 121 56 98 ]
T [ 103 223 108 107 958 86 203 113 1102 252 173 1747 670 219 346 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1065.1 UN1065 1 HOXC11::SOX11 Homo sapiens
HOX::SOX-related factors Homeo domain factors::High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: