Detailed information of matrix profile UN1065.1

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Profile summary

Name: HOXC11::SOX11
Matrix ID: UN1065.1
Class: Homeo domain factors::High-mobility group (HMG) domain factors
Family: HOX::SOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   P35716  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 346 219 670 1747 173 252 1102 113 203 86 958 107 108 223 103 ]
C [ 98 56 121 46 675 128 81 980 951 1229 60 50 89 90 59 ]
G [ 212 189 123 304 85 1098 726 344 436 89 88 135 37 1683 71 ]
T [ 1507 1699 1249 66 1230 685 254 726 573 759 1057 1871 1929 167 1930 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1065.1 UN1065 1 HOXC11::SOX11 Homo sapiens
HOX::SOX-related factors Homeo domain factors::High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: