Detailed information of matrix profile UN1064.1

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Profile summary

Name: HOXC11::IRF8
Matrix ID: UN1064.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Interferon-regulatory factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   Q02556  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 67 5 120 165 149 107 23 26 135 5 26 17 3 4 82 23 11 46 5 0 ]
C [ 0 0 2 0 2 17 62 31 7 92 9 4 8 154 3 12 2 1 2 160 ]
G [ 96 0 2 0 0 10 44 56 18 63 0 1 6 3 76 120 19 2 0 0 ]
T [ 2 160 41 0 14 31 36 52 5 5 130 143 148 4 4 10 133 116 158 5 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1064.1 UN1064 1 HOXC11::IRF8 Homo sapiens
HOX::Interferon-regulatory factors Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: