Detailed information of matrix profile UN1063.1

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Profile summary

Name: HOXC11::GABPA
Matrix ID: UN1063.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 72 60 413 1299 11 182 1309 17 72 32 31 6 19 30 ]
C [ 53 30 29 86 1088 64 17 1282 44 16 1374 1404 31 372 ]
G [ 102 20 41 39 13 1013 105 62 44 17 14 14 1194 827 ]
T [ 1211 1328 955 14 326 179 7 77 1278 1373 19 14 194 209 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1063.1 UN1063 1 HOXC11::GABPA Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: