Detailed information of matrix profile UN1063.1

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Profile summary

Name: HOXC11::GABPA
Matrix ID: UN1063.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 209 194 14 19 1373 1278 77 7 179 326 14 955 1328 1211 ]
C [ 827 1194 14 14 17 44 62 105 1013 13 39 41 20 102 ]
G [ 372 31 1404 1374 16 44 1282 17 64 1088 86 29 30 53 ]
T [ 30 19 6 31 32 72 17 1309 182 11 1299 413 60 72 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1063.1 UN1063 1 HOXC11::GABPA Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: