Detailed information of matrix profile UN1062.1

  1. Home
  2. Matrix > UN1062.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXC11::ETV4
Matrix ID: UN1062.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   P43268  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 83 7 20 455 316 75 23 25 102 15 289 433 374 ]
C [ 335 15 23 8 28 10 19 369 18 14 18 11 45 ]
G [ 39 459 417 6 27 400 6 17 358 24 15 4 34 ]
T [ 32 8 29 20 118 4 441 78 11 436 167 41 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1062.1 UN1062 1 HOXC11::ETV4 Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: