Detailed information of matrix profile UN1046.1

  1. Home
  2. Matrix > UN1046.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: GSX1::PAX2
Matrix ID: UN1046.1
Class: Homeo domain factors::Paired box factors
Family: HOX::Paired domain only
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: A4IFQ3   Q02962  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 12 65 369 156 2 90 452 334 4 2 104 60 211 526 25 48 545 618 56 ]
C [ 217 434 48 186 268 298 4 83 224 637 8 48 63 48 677 63 26 34 91 ]
G [ 290 17 275 244 21 303 219 90 496 5 591 82 397 57 16 167 115 53 90 ]
T [ 210 213 37 143 438 38 54 222 5 85 26 539 58 98 11 451 43 24 492 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1046.1 UN1046 1 GSX1::PAX2 Homo sapiens
HOX::Paired domain only Homeo domain factors::Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: