Detailed information of matrix profile UN1029.1

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Profile summary

Name: GATA3::FLI1
Matrix ID: UN1029.1
Class: Other C4 zinc finger-type factors::Tryptophan cluster factor
Family: C4-GATA-related::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P23771   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 25 26 33 184 12 7 32 104 2 40 0 0 1 1 11 22 ]
C [ 116 30 17 12 19 179 32 48 152 2 0 224 223 5 43 54 ]
G [ 62 24 19 13 7 11 29 61 7 5 0 0 0 181 137 9 ]
T [ 21 144 155 15 186 27 131 11 63 177 224 0 0 37 33 139 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1029.1 UN1029 1 GATA3::FLI1 Homo sapiens
C4-GATA-related::Ets-related Other C4 zinc finger-type factors::Tryptophan cluster factor
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: