Detailed information of matrix profile UN1006.1

  1. Home
  2. Matrix > UN1006.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: FOXB1::GABPA
Matrix ID: UN1006.1
Class: Fork head/winged helix factors::Tryptophan cluster factors
Family: FOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q99853   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 327 485 222 118 9 700 769 856 1 633 8 17 1 7 21 141 ]
C [ 76 57 79 8 153 164 89 0 763 0 1 846 866 8 152 152 ]
G [ 27 286 116 742 2 5 8 22 3 2 3 9 5 786 581 57 ]
T [ 450 52 463 12 716 11 14 2 113 245 868 8 8 79 126 530 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1006.1 UN1006 1 FOXB1::GABPA Homo sapiens
FOX::Ets-related Fork head/winged helix factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: