Detailed information of matrix profile UN1000.1

  1. Home
  2. Matrix > UN1000.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: FIGLA::ETV1
Matrix ID: UN1000.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: Tal-related::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q6QHK4   P50549  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 156 15 10 804 542 262 5 776 22 82 22 26 ]
C [ 620 7 7 18 46 98 793 40 307 230 25 13 ]
G [ 60 837 829 20 31 472 11 36 494 522 21 763 ]
T [ 29 6 19 23 246 33 56 13 42 31 797 63 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1000.1 UN1000 1 FIGLA::ETV1 Homo sapiens
Tal-related::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: