Detailed information of matrix profile UN0990.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: ETV5::TBX21
Matrix ID: UN0990.1
Class: Tryptophan cluster factors::T-Box factors
Family: Ets-related::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P41161   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 8794 910 18 13 5 296 79 10763 332 3011 19 3 12 13 278 1009 ]
C [ 479 826 160 647 6 776 2325 11 8385 58 36 10972 11008 18 1190 2030 ]
G [ 1192 8709 10654 14 11032 435 2165 259 1178 83 9 52 16 10640 8842 829 ]
T [ 583 603 216 10374 5 9541 6479 15 1153 7896 10984 21 12 377 738 7180 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0990.1 UN0990 1 ETV5::TBX21 Homo sapiens
Ets-related::TBrain-related factors Tryptophan cluster factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: