Detailed information of matrix profile UN0990.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: ETV5::TBX21
Matrix ID: UN0990.1
Class: Tryptophan cluster factors::T-Box factors
Family: Ets-related::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P41161   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 7180 738 377 12 21 10984 7896 1153 15 6479 9541 5 10374 216 603 583 ]
C [ 829 8842 10640 16 52 9 83 1178 259 2165 435 11032 14 10654 8709 1192 ]
G [ 2030 1190 18 11008 10972 36 58 8385 11 2325 776 6 647 160 826 479 ]
T [ 1009 278 13 12 3 19 3011 332 10763 79 296 5 13 18 910 8794 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0990.1 UN0990 1 ETV5::TBX21 Homo sapiens
Ets-related::TBrain-related factors Tryptophan cluster factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: