Detailed information of matrix profile UN0966.1

  1. Home
  2. Matrix > UN0966.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ELK1::IRF8
Matrix ID: UN0966.1
Class: Tryptophan cluster factors
Family: Ets-related::Interferon-regulatory factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P19419   Q02556  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 332 129 78 40 88 35 181 545 11 2 1182 222 82 209 184 34 384 ]
C [ 137 48 1850 2015 22 177 8 13 23 2075 71 862 156 55 439 1922 342 ]
G [ 50 52 91 60 2034 1968 11 18 101 10 922 931 15 37 52 124 1349 ]
T [ 1685 1975 185 89 60 24 2004 1628 2069 117 29 189 1951 1903 1529 124 129 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0966.1 UN0966 1 ELK1::IRF8 Homo sapiens
Ets-related::Interferon-regulatory factors Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: