Detailed information of matrix profile UN0949.1

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Profile summary

Name: EGR1::RFX3
Matrix ID: UN0949.1
Class: C2H2 zinc finger factors::Fork head/winged helix factors
Family: C2H2 zinc finger factors::RFX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P18146   P48380  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 8 24 254 8 175 44 39 310 350 2 159 10 81 4 0 17 259 0 41 7 166 ]
C [ 327 325 36 8 2 40 297 0 1 324 122 348 13 353 362 311 106 352 10 261 131 ]
G [ 12 0 16 1 189 278 19 24 10 0 50 0 229 1 4 4 1 2 252 7 54 ]
T [ 19 17 60 349 0 4 11 32 5 40 35 8 43 8 0 34 0 12 63 91 15 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0949.1 UN0949 1 EGR1::RFX3 Homo sapiens
C2H2 zinc finger factors::RFX-related factors C2H2 zinc finger factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: