Detailed information of matrix profile UN0906.1

  1. Home
  2. Matrix > UN0906.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: MLX::FOXA1
Matrix ID: UN0906.1
Class: Basic helix-loop-helix factors (bHLH)::Fork head/winged helix factors
Family: bHLH-ZIP::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9UH92   P55317  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 12 195 32 40 15 458 14 332 66 408 230 64 227 232 83 10 747 0 15 8 0 ]
C [ 45 7 33 15 61 16 610 90 172 25 87 287 105 121 135 741 0 725 1 7 10 ]
G [ 20 540 18 92 156 264 35 32 29 31 249 158 303 234 222 2 5 0 739 16 737 ]
T [ 678 13 672 608 523 17 96 301 488 291 189 246 120 168 315 2 3 30 0 724 8 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0906.1 UN0906 1 MLX::FOXA1 Homo sapiens
bHLH-ZIP::FOX Basic helix-loop-helix factors (bHLH)::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: