Detailed information of matrix profile UN0896.1

  1. Home
  2. Matrix > UN0896.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ATF3::ONECUT1
Matrix ID: UN0896.1
Class: Basic leucine zipper factors (bZIP)::Homeo domain factors
Family: Fos-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P18847   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 0 0 251 2 44 0 15 254 2 28 41 109 159 5 21 66 127 ]
C [ 0 2 0 243 2 2 230 2 72 104 140 0 34 7 177 17 4 ]
G [ 0 252 3 0 210 0 11 0 12 20 18 138 52 70 30 169 71 ]
T [ 256 2 2 11 0 254 0 0 170 104 57 9 11 174 28 4 54 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0896.1 UN0896 1 ATF3::ONECUT1 Homo sapiens
Fos-related::HD-CUT Basic leucine zipper factors (bZIP)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: