Detailed information of matrix profile UN0704.1

  1. Home
  2. Matrix > UN0704.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: hlh-25
Matrix ID: UN0704.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q18054  
Source: 19632181
Comment:

Sequence logo

Frequency matrix

         
A [ 167 637 0 966 0 127 18 43 ]
C [ 278 216 924 0 695 0 786 32 ]
G [ 514 88 8 34 0 873 18 914 ]
T [ 42 59 68 0 305 0 179 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0704.1 UN0704 1 hlh-25 Caenorhabditis elegans
Tal-related Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: