Detailed information of matrix profile UN0479.1

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Profile summary

Name: ZF-C2H2-35
Matrix ID: UN0479.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2H4  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 284 267 195 180 786 756 91 9 7 83 121 231 36 218 9 107 922 272 568 457 334 289 ]
C [ 248 225 243 464 64 83 676 977 7 846 25 95 94 178 956 822 14 189 87 154 235 261 ]
G [ 242 204 350 184 64 62 70 6 11 54 734 525 88 46 18 33 35 211 141 267 208 253 ]
T [ 226 304 213 172 86 99 162 8 975 17 120 150 782 558 17 37 30 328 204 122 223 198 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0479.1 UN0479 1 ZF-C2H2-35 Ciona intestinalis
C2H2 zinc finger factors
UN0479.2 UN0479 2 ZF-C2H2-35 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: