Detailed information of matrix profile MA2722.1

  1. Home
  2. Matrix > MA2722.1

Profile summary
Name: Sl-ERF_F_2
Matrix ID: MA2722.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: G5EM37  
Source: GSE172249
Comment: Validated by inference and motif similarity with ERF115

Sequence logo

Frequency matrix

         
A [ 49 56 65 18 51 33 15 259 31 18 41 39 37 34 75 ]
C [ 362 568 10 652 659 11 603 426 14 641 673 11 628 690 19 ]
G [ 48 35 630 50 22 702 43 21 697 55 6 701 59 10 638 ]
T [ 306 106 60 45 33 19 104 59 23 51 45 14 41 31 33 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2722.1 MA2722 1 Sl-ERF_F_2 Solanum lycopersicum
ERF/DREB AP2/EREBP
     

-log(P-value) = 0.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: