Detailed information of matrix profile MA2718.1

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Profile summary
Name: Sl-ERF_A_3
Matrix ID: MA2718.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: DAP-seq
Validation: 27203113
Uniprot ID: Q8LGR9  
Source: GSE172249
Comment: Validated by inference and motif similarity with RAP2-6

Sequence logo

Frequency matrix

         
A [ 95 77 59 60 36 13 5 7 4 2 6 35 11 60 63 49 56 ]
C [ 23 36 196 15 13 340 0 4 374 1 25 330 2 55 219 20 57 ]
G [ 212 226 17 269 326 0 383 377 0 386 356 1 360 250 23 255 230 ]
T [ 60 51 118 46 15 37 2 2 12 1 3 24 17 25 85 66 47 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2718.1 MA2718 1 Sl-ERF_A_3 Solanum lycopersicum
ERF/DREB AP2/EREBP
     

-log(P-value) = 3.1e-44

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