Detailed information of matrix profile MA2280.1

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Profile summary
Name: Spps
Matrix ID: MA2280.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: bacterial 1-hybrid
Validation: 20627963
Uniprot ID: A0A0B4KHC8  
Source: 21097781
Comment: Similar motif from profile inference.

Sequence logo

Frequency matrix

         
A [ 173 65 44 394 6 36 7 6 12 430 73 ]
C [ 9 812 724 605 992 0 992 993 818 421 627 ]
G [ 742 54 12 0 0 904 0 0 0 14 75 ]
T [ 74 68 217 0 1 58 0 0 168 133 223 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2280.1 MA2280 1 Spps Drosophila melanogaster
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: