Detailed information of matrix profile MA2030.1

  1. Home
  2. Matrix > MA2030.1

Profile summary
Name: MYB96
Matrix ID: MA2030.1
Class: Tryptophan cluster factors
Family: MYB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 26484765
Uniprot ID: Q24JK1  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 63 46 11 20 38 8 1 131 113 0 11 116 14 8 90 50 21 ]
C [ 20 36 78 50 74 107 123 1 15 132 23 2 116 102 10 43 78 ]
G [ 10 8 11 10 10 1 0 0 3 0 1 6 0 0 5 12 8 ]
T [ 40 43 33 53 11 17 9 1 2 1 98 9 3 23 28 28 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2030.1 MA2030 1 MYB96 Arabidopsis thaliana
MYB Tryptophan cluster factors
MA2030.2 MA2030 2 MYB96 Arabidopsis thaliana
MYB Tryptophan cluster factors
     

-log(P-value) = 101.054

TFFM details

TFFM ID: TFFM0984.1

ChIP-seq Centrality
-log(P-value): 261.141

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0984.1

ChIP-seq Centrality
-log(P-value): 266.66

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: