Detailed information of matrix profile MA1960.1

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Profile summary
Name: MGA::EVX1
Matrix ID: MA1960.1
Class: T-Box factors::Homeo domain factors
Family: TBX6-related factors::HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P49640   Q8IWI9  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 2290 607 27 104 3 833 22 2290 2290 90 14 1276 ]
C [ 140 73 23 45 21 159 64 0 69 41 152 175 ]
G [ 1471 2290 2290 25 2290 219 83 5 74 19 1393 657 ]
T [ 615 127 74 2290 0 1078 2290 54 95 2290 897 1014 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1960.1 MA1960 1 MGA::EVX1 Homo sapiens
TBX6-related factors::HOX T-Box factors::Homeo domain factors
MA1960.2 MA1960 2 MGA::EVX1 Homo sapiens
TBX6-related factors::HOX T-Box factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: