Detailed information of matrix profile MA1911.2

  1. Home
  2. Matrix > MA1911.2

Profile summary
Name: Rel
Matrix ID: MA1911.2
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 32647255
Uniprot ID: Q4H2V9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 71 8 115 832 859 185 14 92 69 103 ]
C [ 184 6 6 7 21 11 22 323 669 629 ]
G [ 556 977 845 118 22 15 8 38 46 139 ]
T [ 189 9 35 43 98 789 956 547 217 130 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1911.1 MA1911 1 Rel Ciona intestinalis
NF-kappaB-related factors Rel homology region (RHR) factors
MA1911.2 MA1911 2 Rel Ciona intestinalis
NF-kappaB-related factors Rel homology region (RHR) factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: