| Name: | Nk-3 |
| Matrix ID: | MA1904.1 |
| Class: | Homeo domain factors |
| Family: | NK |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: |
| A [ | 351 | 306 | 290 | 249 | 249 | 362 | 425 | 75 | 40 | 908 | 936 | 49 | 62 | 448 | 345 | 227 | 264 | 297 | 293 | 320 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 151 | 160 | 164 | 196 | 234 | 203 | 165 | 101 | 67 | 26 | 16 | 26 | 42 | 78 | 207 | 239 | 209 | 170 | 183 | 182 | ] |
| G [ | 163 | 196 | 239 | 242 | 185 | 207 | 213 | 84 | 16 | 38 | 25 | 30 | 79 | 312 | 253 | 197 | 201 | 204 | 178 | 160 | ] |
| T [ | 335 | 339 | 306 | 313 | 332 | 227 | 196 | 741 | 877 | 29 | 24 | 896 | 818 | 161 | 195 | 336 | 326 | 330 | 346 | 338 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1904.1 | MA1904 | 1 | Nk-3 |
Ciona intestinalis
|
NK | Homeo domain factors |  |
| MA1904.2 | MA1904 | 2 | Nk-3 |
Ciona intestinalis
|
NK | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: