| Name: | Irf-b |
| Matrix ID: | MA1888.1 |
| Class: | Tryptophan cluster factors |
| Family: | Interferon-regulatory factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 32750546 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: |
| A [ | 124 | 858 | 419 | 940 | 126 | 97 | 299 | 199 | 883 | 15 | 19 | 259 | 10 | 29 | 107 | 194 | 174 | 177 | 186 | 190 | 200 | 130 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 22 | 47 | 10 | 14 | 676 | 176 | 226 | 207 | 10 | 71 | 3 | 56 | 19 | 917 | 33 | 479 | 249 | 185 | 287 | 149 | 385 | 218 | ] |
| G [ | 842 | 70 | 259 | 31 | 168 | 79 | 263 | 388 | 85 | 880 | 4 | 14 | 36 | 14 | 829 | 63 | 167 | 128 | 153 | 321 | 164 | 322 | ] |
| T [ | 12 | 25 | 312 | 15 | 30 | 648 | 213 | 207 | 21 | 33 | 974 | 672 | 935 | 40 | 31 | 264 | 410 | 510 | 373 | 340 | 250 | 330 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1888.1 | MA1888 | 1 | Irf-b |
Ciona intestinalis
|
Interferon-regulatory factors | Tryptophan cluster factors |  |
| MA1888.2 | MA1888 | 2 | Irf-b |
Ciona intestinalis
|
Interferon-regulatory factors | Tryptophan cluster factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: