| Name: | Hmbox1 |
| Matrix ID: | MA1881.1 |
| Class: | Homeo domain factors |
| Family: | POU domain factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: |
| A [ | 260 | 268 | 261 | 265 | 280 | 393 | 407 | 97 | 40 | 891 | 929 | 48 | 76 | 523 | 331 | 280 | 241 | 248 | 245 | 245 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 225 | 227 | 231 | 220 | 195 | 163 | 151 | 86 | 30 | 27 | 17 | 23 | 42 | 89 | 211 | 205 | 216 | 227 | 232 | 239 | ] |
| G [ | 265 | 251 | 245 | 237 | 204 | 195 | 167 | 90 | 14 | 30 | 24 | 25 | 41 | 190 | 225 | 221 | 207 | 221 | 234 | 245 | ] |
| T [ | 250 | 253 | 263 | 278 | 321 | 249 | 275 | 727 | 915 | 52 | 30 | 904 | 841 | 197 | 233 | 294 | 336 | 305 | 289 | 271 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1881.1 | MA1881 | 1 | Hmbox1 |
Ciona intestinalis
|
POU domain factors | Homeo domain factors |  |
| MA1881.2 | MA1881 | 2 | Hmbox1 |
Ciona intestinalis
|
POU domain factors | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: