| Name: | GATA1/2/3 |
| Matrix ID: | MA1875.1 |
| Class: | Other C4 zinc finger-type factors |
| Family: | C4-GATA-related |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 21238449 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: |
| A [ | 280 | 287 | 297 | 269 | 305 | 280 | 263 | 666 | 17 | 970 | 8 | 835 | 800 | 214 | 323 | 276 | 280 | 274 | 272 | 276 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 218 | 213 | 208 | 202 | 211 | 212 | 239 | 135 | 11 | 8 | 13 | 45 | 53 | 245 | 251 | 212 | 238 | 233 | 235 | 232 | ] |
| G [ | 228 | 228 | 221 | 263 | 228 | 223 | 262 | 43 | 948 | 9 | 6 | 29 | 67 | 294 | 241 | 216 | 213 | 211 | 212 | 211 | ] |
| T [ | 274 | 271 | 274 | 266 | 256 | 285 | 237 | 156 | 24 | 13 | 973 | 91 | 80 | 247 | 185 | 296 | 268 | 282 | 281 | 281 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1875.1 | MA1875 | 1 | GATA1/2/3 |
Ciona intestinalis
|
C4-GATA-related | Other C4 zinc finger-type factors |  |
| MA1875.2 | MA1875 | 2 | GATA1/2/3 |
Ciona intestinalis
|
C4-GATA-related | Other C4 zinc finger-type factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: