| Name: | GATA-a |
| Matrix ID: | MA1874.1 |
| Class: | Other C4 zinc finger-type factors |
| Family: | C4-GATA-related |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 21238449 |
| Uniprot ID: | Q4H3F6 |
| Source: | 31267468 |
| Comment: |
| A [ | 267 | 273 | 269 | 262 | 276 | 285 | 235 | 229 | 14 | 972 | 5 | 911 | 815 | 164 | 297 | 260 | 272 | 266 | 261 | 254 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 227 | 234 | 234 | 231 | 227 | 216 | 307 | 150 | 13 | 8 | 9 | 6 | 50 | 292 | 244 | 242 | 248 | 242 | 257 | 256 | ] |
| G [ | 242 | 231 | 235 | 240 | 234 | 252 | 246 | 35 | 963 | 8 | 4 | 11 | 64 | 344 | 295 | 244 | 236 | 234 | 220 | 223 | ] |
| T [ | 264 | 263 | 263 | 268 | 263 | 248 | 213 | 585 | 10 | 11 | 982 | 72 | 70 | 200 | 164 | 254 | 244 | 258 | 261 | 266 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1874.1 | MA1874 | 1 | GATA-a |
Ciona intestinalis
|
C4-GATA-related | Other C4 zinc finger-type factors |  |
| MA1874.2 | MA1874 | 2 | GATA-a |
Ciona intestinalis
|
C4-GATA-related | Other C4 zinc finger-type factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: