| Name: | Atbf |
| Matrix ID: | MA1844.1 |
| Class: | Homeo domain factors |
| Family: | HOX |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | Q1RLB9 |
| Source: | 31267468 |
| Comment: |
| A [ | 341 | 363 | 346 | 318 | 300 | 224 | 178 | 862 | 917 | 27 | 29 | 910 | 654 | 202 | 241 | 333 | 307 | 360 | 384 | 334 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 141 | 152 | 165 | 184 | 199 | 241 | 245 | 60 | 27 | 24 | 30 | 14 | 113 | 232 | 195 | 201 | 218 | 196 | 164 | 153 | ] |
| G [ | 162 | 182 | 198 | 208 | 243 | 252 | 96 | 35 | 25 | 18 | 28 | 38 | 134 | 192 | 214 | 198 | 188 | 162 | 140 | 132 | ] |
| T [ | 356 | 303 | 292 | 290 | 258 | 283 | 481 | 44 | 32 | 930 | 913 | 38 | 99 | 374 | 350 | 269 | 288 | 282 | 313 | 381 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1844.1 | MA1844 | 1 | Atbf |
Ciona intestinalis
|
HOX | Homeo domain factors |  |
| MA1844.2 | MA1844 | 2 | Atbf |
Ciona intestinalis
|
HOX | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: