Detailed information of matrix profile MA1816.1

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Profile summary
Name: O11
Matrix ID: MA1816.1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: ChIP-seq
Validation: 7742856
Uniprot ID: A0A1D6EAS7  
Source: 29436476
Comment:

Sequence logo

Frequency matrix

         
A [ 1186 1291 964 22 5442 3 4 8 163 1431 1359 1105 ]
C [ 1538 1413 1164 5216 10 5439 17 0 60 1901 1392 1631 ]
G [ 1632 1400 1901 61 0 15 5435 12 5212 1164 1416 1539 ]
T [ 1104 1356 1431 161 8 3 4 5440 25 964 1293 1185 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1816.1 MA1816 1 O11 Zea mays
bHLH Basic helix-loop-helix factors (bHLH)
MA1816.2 MA1816 2 O11 Zea mays
bHLH Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 52.6522

TFFM details

TFFM ID: TFFM0936.1

ChIP-seq Centrality
-log(P-value): 1211.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0936.1

ChIP-seq Centrality
-log(P-value): 1303.31

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

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GC Content: