| Name: | PRDM9 |
| Matrix ID: | MA1723.1 |
| Class: | C2H2 zinc finger factors |
| Family: | Factors with multiple dispersed zinc fingers |
| Collection: | CORE |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-exo |
| Validation: | 29072575 |
| Uniprot ID: | Q9NQV7 |
| Source: | 28273063 |
| Comment: |
| A [ | 336 | 151 | 248 | 37 | 55 | 134 | 300 | 774 | 160 | 125 | 29 | 450 | 2 | 20 | 353 | 397 | 371 | 265 | 783 | 318 | 336 | 599 | 353 | 257 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 37 | 29 | 11 | 2 | 2 | 169 | 379 | 11 | 204 | 11 | 2 | 90 | 2 | 2 | 292 | 178 | 2 | 423 | 2 | 81 | 300 | 116 | 160 | 125 | ] |
| G [ | 458 | 713 | 336 | 906 | 941 | 485 | 213 | 204 | 529 | 853 | 932 | 344 | 993 | 976 | 204 | 274 | 441 | 107 | 169 | 572 | 257 | 230 | 406 | 476 | ] |
| T [ | 169 | 107 | 406 | 55 | 2 | 213 | 107 | 11 | 107 | 11 | 37 | 116 | 2 | 2 | 151 | 151 | 186 | 204 | 46 | 29 | 107 | 55 | 81 | 143 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1723.1 | MA1723 | 1 | PRDM9 |
Homo sapiens
|
Factors with multiple dispersed zinc fingers | C2H2 zinc finger factors |  |
| MA1723.2 | MA1723 | 2 | PRDM9 |
Homo sapiens
|
Factors with multiple dispersed zinc fingers | C2H2 zinc finger factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: