Detailed information of matrix profile MA1561.2

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Profile summary
Name: SOX12
Matrix ID: MA1561.2
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18403418
Uniprot ID: O15370  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 854 153 48 47 854 854 0 854 854 129 ]
C [ 267 854 854 26 26 2 854 0 91 211 ]
G [ 109 58 34 854 2 4 0 0 44 57 ]
T [ 138 78 56 48 1 0 3 0 20 854 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1561.1 MA1561 1 SOX12 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
MA1561.2 MA1561 2 SOX12 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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