Detailed information of matrix profile MA1549.1

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Profile summary
Name: POU6F1
Matrix ID: MA1549.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26265007
Uniprot ID: Q14863  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 2756 164 6413 6413 0 67 6413 314 1972 1577 ]
C [ 416 273 179 0 0 206 96 851 3065 1238 ]
G [ 1930 10 255 0 298 5799 0 6413 3348 1534 ]
T [ 1312 6413 0 0 6413 615 411 1855 1462 2064 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1549.1 MA1549 1 POU6F1 Homo sapiens
POU domain factors Homeo domain factors
MA1549.2 MA1549 2 POU6F1 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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