Detailed information of matrix profile MA1533.2

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Profile summary
Name: NR1I2
Matrix ID: MA1533.2
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12016543
Uniprot ID: O75469  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 4 9 164 164 3 7 9 51 66 0 21 164 164 0 1 ]
C [ 60 0 40 61 164 50 86 30 23 46 2 41 51 164 54 ]
G [ 9 164 24 0 1 3 51 56 40 0 164 12 2 0 5 ]
T [ 103 2 13 0 0 114 18 27 36 117 9 5 0 3 109 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1533.1 MA1533 1 NR1I2 Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA1533.2 MA1533 2 NR1I2 Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: