Detailed information of matrix profile MA1461.2

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Profile summary
Name: sv
Matrix ID: MA1461.2
Class: Paired box factors
Family: Paired domain only
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: HT-SELEX
Validation: 19718746
Uniprot ID: O16804  
Source: 25779349
Comment: Class and TF information is inferred from the human ortholog to sv, obtained from Flybase.

Sequence logo

Frequency matrix

         
A [ 45 1 38 1 983 1 12 1 526 4 1 669 179 26 202 279 ]
C [ 669 2 13 868 8 890 3 868 68 59 356 5 383 312 4 444 ]
G [ 213 971 2 1 2 1 982 129 29 2 640 323 284 15 734 273 ]
T [ 71 25 945 128 4 106 1 1 375 934 2 1 152 644 58 2 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1461.1 MA1461 1 sv Drosophila melanogaster
Paired domain only Paired box factors
MA1461.2 MA1461 2 sv Drosophila melanogaster
Paired domain only Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: