Detailed information of matrix profile MA1409.2

  1. Home
  2. Matrix > MA1409.2

Profile summary
Name: OsRR22
Matrix ID: MA1409.2
Class: Tryptophan cluster factors
Family: GARP_ARR-B
Collection: CORE
Taxon: Plants
Species: Oryza sativa
Data Type: PBM
Validation: 12610214
Uniprot ID: Q5SML5  
Source: 27931185
Comment:

Sequence logo

Frequency matrix

         
A [ 62666 6173 2838 7297 19416 98511 1028 1322 4047 ]
C [ 5511 46756 92633 611 464 510 778 97670 6041 ]
G [ 11356 33145 2838 91648 7724 484 287 522 3042 ]
T [ 20468 13926 1690 444 72395 495 97906 486 86870 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1409.1 MA1409 1 OsRR22 Oryza sativa
GARP_ARR-B Tryptophan cluster factors
MA1409.2 MA1409 2 OsRR22 Oryza sativa
GARP_ARR-B Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: