Detailed information of matrix profile MA1351.2

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Profile summary
Name: GBF3
Matrix ID: MA1351.2
Class: Basic leucine zipper factors (bZIP)
Family: Group G
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 9680995
Uniprot ID: P42776  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1144 7456 260 341 136 133 385 828 7429 2879 2928 ]
C [ 4087 509 8349 139 113 60 212 8130 400 1756 1909 ]
G [ 2431 636 340 8749 27 9137 7410 275 831 1943 1879 ]
T [ 1799 860 512 232 9185 131 1454 228 801 2883 2745 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1351.1 MA1351 1 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
MA1351.2 MA1351 2 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
MA1351.3 MA1351 3 GBF3 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
     

-log(P-value) = 3912.52

TFFM details

TFFM ID: TFFM0846.1

ChIP-seq Centrality
-log(P-value): 11468.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0846.1

ChIP-seq Centrality
-log(P-value): 11885.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: