Detailed information of matrix profile MA1334.1

  1. Home
  2. Matrix > MA1334.1

Profile summary
Name: BZIP11
Matrix ID: MA1334.1
Class: Basic leucine zipper factors (bZIP)
Family: Group S
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9680995
Uniprot ID: O65683  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 73 16 142 0 591 0 3 0 43 571 2 67 344 191 169 ]
C [ 79 14 428 572 0 588 2 0 534 0 46 501 60 96 182 ]
G [ 105 418 0 19 0 2 586 0 14 19 373 3 38 72 68 ]
T [ 334 143 21 0 0 1 0 591 0 1 170 20 149 232 172 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1334.1 MA1334 1 BZIP11 Arabidopsis thaliana
Group S Basic leucine zipper factors (bZIP)
MA1334.2 MA1334 2 BZIP11 Arabidopsis thaliana
Group S Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0346.1

ChIP-seq Centrality
-log(P-value): 24993.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0346.1

ChIP-seq Centrality
-log(P-value): 24951.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: