Detailed information of matrix profile MA1322.3

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Profile summary
Name: SPL9
Matrix ID: MA1322.3
Class: C3H(C),C2HC zinc-fingers like factors
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 16554053
Uniprot ID: Q700W2  
Source: 10524240
Comment:

Sequence logo

Frequency matrix

         
A [ 294 180 94 31 17 2053 25 ]
C [ 57 1710 1844 19 7 20 2010 ]
G [ 169 51 56 2027 10 22 29 ]
T [ 1596 175 122 39 2082 21 52 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1322.1 MA1322 1 SPL9 Arabidopsis thaliana
SBP C3H(C),C2HC zinc-fingers like factors
MA1322.2 MA1322 2 SPL9 Arabidopsis thaliana
SBP C3H(C),C2HC zinc-fingers like factors
MA1322.3 MA1322 3 SPL9 Arabidopsis thaliana
SBP C3H(C),C2HC zinc-fingers like factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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