Detailed information of matrix profile MA1206.1

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Profile summary
Name: ARF2
Matrix ID: MA1206.1
Class: B3
Family: ARF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25002510
Uniprot ID: Q94JM3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 245 151 0 200 112 559 0 562 271 219 ]
C [ 116 61 395 384 0 0 599 37 57 87 ]
G [ 50 193 204 15 487 40 0 0 131 207 ]
T [ 188 194 0 0 0 0 0 0 140 86 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1206.1 MA1206 1 ARF2 Arabidopsis thaliana
ARF B3
MA1206.2 MA1206 2 ARF2 Arabidopsis thaliana
ARF B3
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0227.1

ChIP-seq Centrality
-log(P-value): 5754.53

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0227.1

ChIP-seq Centrality
-log(P-value): 5533.85

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: