Detailed information of matrix profile MA1123.2

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Profile summary
Name: TWIST1
Matrix ID: MA1123.2
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 29453333
Uniprot ID: Q15672  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 7736 8588 18544 582 26232 214 1407 274 174 852 9428 8259 6758 ]
C [ 6213 7273 4069 25975 288 908 24166 210 117 2336 5772 5722 6485 ]
G [ 6561 7402 2919 396 456 1687 1320 136 26665 20412 4597 5530 5761 ]
T [ 6823 4070 1801 380 357 24524 440 26713 377 3733 7536 7822 8329 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1123.1 MA1123 1 TWIST1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA1123.2 MA1123 2 TWIST1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA1123.3 MA1123 3 TWIST1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0155.2

ChIP-seq Centrality
-log(P-value): 19404.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0155.2

ChIP-seq Centrality
-log(P-value): 19306.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: