This page shows detailed deep learning-derived predictions and motifs for CTCF in upper lobe of left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000441.1 |
| Cell line/tissue: | upper lobe of left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR972LYL |
| Model: | BPNet |
| A [ | -1.50e-03 | -4.71e-04 | 2.46e-02 | -1.64e-03 | -4.55e-03 | 5.98e-02 | -2.78e-04 | 1.54e-02 | -2.73e-03 | -6.91e-04 | -9.67e-04 | -2.71e-03 | 7.67e-03 | -2.48e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.76e-02 | 1.51e-01 | -5.64e-04 | 5.39e-02 | 1.35e-02 | -8.92e-05 | -1.75e-05 | -1.22e-05 | 5.07e-06 | -1.13e-05 | 2.06e-04 | 7.16e-02 | -1.61e-04 | 2.30e-02 | ] |
| G [ | -1.34e-03 | -1.40e-04 | 5.39e-03 | 1.06e-02 | -1.61e-03 | 4.49e-04 | 1.47e-01 | 5.56e-02 | 4.12e-02 | 1.32e-01 | 8.70e-02 | -1.76e-04 | 4.30e-02 | 1.19e-02 | ] |
| T [ | -2.29e-03 | -4.01e-04 | -4.71e-03 | -1.42e-03 | 1.52e-02 | -1.69e-03 | -2.07e-04 | -3.59e-04 | 4.76e-03 | -3.90e-04 | -4.95e-04 | -2.89e-03 | -2.57e-03 | -1.01e-03 | ] |
| A [ | 3356 | 46 | 25505 | 2098 | 5969 | 31811 | 283 | 13483 | 2731 | 662 | 1415 | 5879 | 14756 | 4154 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 31298 | 39185 | 1590 | 22286 | 16212 | 1523 | 74 | 430 | 2585 | 457 | 2213 | 27769 | 2736 | 18524 | ] |
| G [ | 2359 | 10 | 6750 | 13721 | 3720 | 3509 | 38754 | 24974 | 20871 | 37526 | 32526 | 2085 | 19738 | 12669 | ] |
| T [ | 2236 | 8 | 5404 | 1144 | 13347 | 2405 | 138 | 362 | 13061 | 604 | 3095 | 3517 | 2019 | 3903 | ] |
