JASPAR Collection UNVALIDATED

Total 1363 profiles

These profiles are regarded as unvalidated because our curators failed to find any orthogonal support from existing literature. We encourage the community to perform experiments and/or point us to literature that our curators missed in order to support these profiles.
Display profiles
ID Name Species Class Family Sequence logo
UN1305.1 sox-2 Caenorhabditis elegans High-mobility group (HMG) domain factors SOX-related factors
UN1306.1 ces-1 Caenorhabditis elegans C2H2 zinc finger factors More than 3 adjacent zinc fingers
UN1307.1 dmd-6 Caenorhabditis elegans DM-type intertwined zinc finger factors DMRT factors
Showing 3 profiles of page 137 from 137 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download the PFMs of the model(s) selected in four different formats.