JASPAR Collection UNVALIDATED

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Total 1363 profiles

These profiles are regarded as unvalidated because our curators failed to find any orthogonal support from existing literature. We encourage the community to perform experiments and/or point us to literature that our curators missed in order to support these profiles.
Display profiles
ID Name Species Class Family Sequence logo
UN1285.1 TraesCS6A02G243500 Triticum aestivum AP2/EREBP ERF/DREB
UN1286.1 TraesCS6B02G451300 Triticum aestivum GCM domain factors NAC
UN1287.1 TraesCS7A02G357500 Triticum aestivum GCM domain factors NAC
UN1288.1 TraesCS7A02G299600 Triticum aestivum GCM domain factors NAC
UN1289.1 TraesCS6A02G196500 Triticum aestivum AP2/EREBP ERF/DREB
UN1290.1 TraesCS7D02G295100 Triticum aestivum GCM domain factors NAC
UN1291.1 TraesCS6D02G225700 Triticum aestivum AP2/EREBP ERF/DREB
UN1292.1 TraesCS2A02G389200 Triticum aestivum Tryptophan cluster factors Trihelix
UN1293.1 TraesCS1A02G220000 Triticum aestivum AP2/EREBP ERF/DREB
UN1294.1 TraesCS1A02G220000 Triticum aestivum AP2/EREBP ERF/DREB
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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.