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Total 4572 profiles

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ID Name Species Class Family Sequence logo
MA1186.2 YAB4 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1187.1 RVE4 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1187.2 RVE4 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1188.1 At3g11280 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1189.1 AT5G61620 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1189.2 AT5G61620 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1190.1 RVE5 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1190.2 RVE5 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1191.1 RVE7L Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1191.2 RVE7L Arabidopsis thaliana Tryptophan cluster factors MYB-related
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Analyze selected profiles

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.