JASPAR CORE

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Total 4572 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0604.1 Atf1 Mus musculus Basic leucine zipper factors (bZIP) CREB-related factors
MA0605.1 Atf3 Mus musculus Basic leucine zipper factors (bZIP) Fos-related
MA0605.2 ATF3 Homo sapiens Basic leucine zipper factors (bZIP) Fos-related
MA0605.3 ATF3 Homo sapiens Basic leucine zipper factors (bZIP) Fos-related
MA0606.1 NFAT5 Gallus gallus Rel homology region (RHR) factors NFAT-related factors
MA0606.2 Nfat5 Mus musculus Rel homology region (RHR) factors NFAT-related factors
MA0606.3 Nfat5 Mus musculus Rel homology region (RHR) factors NFAT-related factors
MA0607.1 Bhlha15 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA0607.2 BHLHA15 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA0608.1 Creb3l2 Mus musculus Basic leucine zipper factors (bZIP) CREB-related factors
Showing 10 profiles of page 119 from 458 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.